Olsenella umbonata lac31

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Coriobacteriia

Order

Coriobacteriales

Family

Atopobiaceae

Genus

Parafannyhessea

Description

Olsenella umbonata lac31 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. This strain's genetic information can be accessed through the accession number LT629759.1, providing a reference for further studies and comparisons with other microbial species. As a member of the genus Olsenella, this organism is expected to inhabit specific ecological niches within the microbiome, particularly in association with human health. While specific ecological roles of Olsenella umbonata lac31 are not detailed in the supplied evidence, members of the genus are often associated with the human oral cavity and gastrointestinal tract, where they may play a role in metabolic processes and microbial interactions. The presence of a single replicon suggests a streamlined genetic architecture, which can influence the organism's adaptability and response to environmental changes. This trait can be particularly relevant in understanding how Olsenella umbonata lac31 interacts with other microorganisms, as well as its potential contributions to the overall microbial community dynamics. In summary, Olsenella umbonata lac31, with its single replicon and identifiable genetic access point, represents a unique strain within the Olsenella genus. Its ecological role, while not explicitly defined, may contribute to the intricate balance of microbial communities in human-associated environments, warranting further investigation into its biological significance.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassCoriobacteriia
OrderCoriobacteriales
FamilyAtopobiaceae
GenusParafannyhessea
SpeciesParafannyhessea umbonata
Strainlac31

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Olsenella umbonata lac31, Chromosome

Gene Summary

Adenine Count

410966 bp

Thymine Count

413842 bp

Guanine Count

768382 bp

Cytosine Count

759903 bp

Genome Length

2353193 bp

Protein-coding Genes

2024 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
starch synthaseSAMN04489857_1131A9KMA3Positive1219582 - 122183781133.0
uncharacterized protein yjbi, contains pentapeptide repeatsSAMN04489857_1132Not AvailableNegative1221974 - 122265424254.5
rna polymerase sigma-70 factor, ecf subfamilySAMN04489857_1133H8F2P4Positive1222791 - 122342923744.9
protein of unknown functionSAMN04489857_1134Not AvailablePositive1223389 - 122442335054.9
transcriptional regulator, contains xre-family hth domainSAMN04489857_1135Q5WNW9Positive1224751 - 122530520128.3
conserved hypothetical integral membrane proteinSAMN04489857_1136Q5XCC9Negative1225313 - 122639536946.1
dna-binding transcriptional regulator, lysr familySAMN04489857_1137P39647Positive1226535 - 122744333780.4
thioredoxinSAMN04489857_1138P10472Negative1227467 - 122778411808.3
dna-binding transcriptional regulator, hxlr familySAMN04489857_1139Q9Z9W1Positive1227898 - 122829314276.4
mfs transporter, dha1 family, l-arabinose/isopropyl-beta-d-thiogalactopyranoside export proteinSAMN04489857_1140B7V6N7Negative1228366 - 122961642613.3

Displaying genes 1111 – 1120 of 2094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.