Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | EUU25_13805 | O28646 | Positive | 2940631 - 2940852 | 8519.33 |
| mfs transporter | EUU25_13810 | P02982 | Positive | 2940987 - 2942204 | 42709.5 |
| glycerophosphodiester phosphodiesterase | EUU25_13815 | Q9SD81 | Negative | 2942201 - 2943268 | 38581.3 |
| arsc family reductase | EUU25_13820 | P24178 | Negative | 2943324 - 2943674 | 12844.6 |
| hypothetical protein | EUU25_13825 | Not Available | Positive | 2944096 - 2944734 | 23049.6 |
| formate-dependent phosphoribosylglycinamide formyltransferase | EUU25_13830 | Q2N8K3 | Negative | 2945087 - 2946274 | 42363.7 |
| duf2805 domain-containing protein | EUU25_13835 | Not Available | Negative | 2946271 - 2946486 | 8235.84 |
| sigma-54-dependent fis family transcriptional regulator | EUU25_13840 | Not Available | Negative | 2946486 - 2946563 | 2930.21 |
| glutamine-hydrolyzing gmp synthase | EUU25_13845 | Q5NN19 | Negative | 2946563 - 2948122 | 56434.7 |
| sigma-54-dependent fis family transcriptional regulator | EUU25_13850 | Not Available | Negative | 2948281 - 2948628 | 12684.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
