Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lacus |
| Strain | IMCC1753 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750717 bp
Thymine Count
750271 bp
Guanine Count
976518 bp
Cytosine Count
981137 bp
Genome Length
3458743 bp
Protein-coding Genes
3234 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc ribbon domain-containing protein | EUU25_01305 | Not Available | Positive | 281565 - 282764 | 42027.9 |
| duf4136 domain-containing protein | EUU25_01310 | Not Available | Negative | 282769 - 283428 | 24188.6 |
| tryptophan--trna ligase | EUU25_01315 | Q9AC05 | Negative | 283603 - 284601 | 36084.2 |
| murein biosynthesis integral membrane protein murj | EUU25_01320 | P56882 | Negative | 284606 - 286192 | 57007.9 |
| protein-export chaperone secb | EUU25_01325 | Q2GAU0 | Negative | 286217 - 286726 | 18531.7 |
| tim44 domain-containing protein | EUU25_01330 | Not Available | Positive | 286963 - 287643 | 24792.3 |
| hypothetical protein | EUU25_01335 | P0A936 | Positive | 287656 - 288891 | 43125.8 |
| dna mismatch repair protein muts | EUU25_01340 | Not Available | Positive | 288900 - 289454 | 20059.4 |
| succinyl-diaminopimelate desuccinylase | EUU25_01345 | Q2GAU5 | Negative | 289475 - 290611 | 40219.1 |
| hypothetical protein | EUU25_01350 | Not Available | Negative | 290651 - 292000 | 49334.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
