Sphingorhabdus lacus IMCC1753

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingorhabdaceae

Genus

Sphingorhabdus

Description

Sphingorhabdus lacus IMCC1753 is a bacterial strain characterized by a single replicon, which is significant for its genetic organization and stability. The genomic data for this strain is accessible under the accession number CP035733.1, providing a foundation for further research and analysis of its genetic makeup. Sphingorhabdus lacus belongs to a genus known for its potential ecological roles, particularly in aquatic environments. The presence of a single replicon may suggest streamlined genetic processes, which can be advantageous in adapting to specific ecological niches. This trait might facilitate efficient replication and maintenance of essential functions, particularly in fluctuating conditions typically found in lake ecosystems. Understanding the genetic and biological characteristics of Sphingorhabdus lacus IMCC1753 can offer insights into its ecological interactions and contributions within its habitat. This strain may play a role in nutrient cycling, influencing the microbial community dynamics in freshwater systems. Furthermore, its genomic characteristics could inform studies on the adaptation mechanisms of bacteria to aquatic environments. As research progresses, Sphingorhabdus lacus IMCC1753 may serve as a model for exploring the ecological significance of bacteria in freshwater habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingorhabdaceae
GenusSphingorhabdus
SpeciesSphingorhabdus lacus
StrainIMCC1753

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingorhabdus lacus IMCC1753, Chromosome

Gene Summary

Adenine Count

750717 bp

Thymine Count

750271 bp

Guanine Count

976518 bp

Cytosine Count

981137 bp

Genome Length

3458743 bp

Protein-coding Genes

3234 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent chaperone clpbEUU25_10855Q98G96Positive2319256 - 232183293675.2
hypothetical proteinEUU25_10860Not AvailableNegative2321857 - 232216510794.8
hypothetical proteinEUU25_10865Not AvailableNegative2322169 - 23224509800.67
hypothetical proteinEUU25_10870Q8BSY0Negative2322546 - 232374844266.1
hypothetical proteinEUU25_10875Not AvailablePositive2323778 - 232479737313.9
sulfotransferase family proteinEUU25_10880O67178Negative2324794 - 232638057783.1
tonb-dependent receptorEUU25_10885A1AIE8Negative2326484 - 2329672111934.0
tonb-dependent receptorEUU25_10890Q93SE0Negative2330010 - 2333051106910.0
peptidylprolyl isomeraseEUU25_10895Q8YHB5Positive2333392 - 233404523084.0
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaEUU25_10900Q1GR22Positive2334064 - 233509537994.3

Displaying genes 2171 – 2180 of 3284 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.