Roseibium alexandrii DFL-11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Roseibium

Description

Roseibium alexandrii DFL-11 is a Gram-negative bacterium characterized by its possession of three replicons. This feature indicates a complex genomic structure, which may contribute to its adaptability and potential metabolic versatility. The organism is documented under the accessions CM011002.1, CM011003.1, and CM011004.1, providing a basis for genomic analysis and further research into its biological functions. As a member of the Roseibium genus, R. alexandrii DFL-11 is likely involved in various ecological processes, particularly in aquatic environments. Gram-negative bacteria are known for their diverse roles in nutrient cycling and interaction with other microorganisms, which can influence ecosystem dynamics. The multiple replicons suggest a capacity for rapid genetic adaptation, enabling R. alexandrii DFL-11 to respond to environmental changes effectively. In summary, the structural attributes of Roseibium alexandrii DFL-11, including its Gram-negative status and the presence of three replicons, highlight its potential ecological significance and adaptability. Further investigation into its metabolic pathways and ecological roles could provide insights into its contributions to microbial communities and biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusRoseibium
SpeciesRoseibium alexandrii
StrainDFL-11

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseibium alexandrii DFL-11, Chromosome

Gene Summary

Adenine Count

1143736 bp

Thymine Count

1166550 bp

Guanine Count

1498323 bp

Cytosine Count

1490641 bp

Genome Length

5300354 bp

Protein-coding Genes

4815 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSADFL11_00051270Not AvailableNegative42478 - 425703493.32
plasmid partitioning protein repaSADFL11_166P05682Negative42567 - 4386247252.0
sugar transferase involved in lipopolysaccharide synthesisSADFL11_118P71062Negative44345 - 4559244853.4
lipid a core - o-antigen ligase/related enzymeSADFL11_150Q9ZDH0Negative45630 - 4685043834.0
putative nucleoside-diphosphate sugar epimeraseSADFL11_131P39853Positive47014 - 4889767688.6
hypothetical proteinSADFL11_140Not AvailablePositive49336 - 5097355735.5
hemolysin-type calcium-binding repeat (2 copies)SADFL11_159Not AvailableNegative51159 - 5291362230.0
ntp pyrophosphohydrolase including oxidative damage repair enzymeSADFL11_145P54570Negative53270 - 5379719567.9
hypothetical proteinSADFL11_158Not AvailablePositive53978 - 5506039560.9
putative glycosyltransferaseSADFL11_115P55465Negative55255 - 58608124571.0

Displaying genes 5111 – 5120 of 5128 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.