Roseibium alexandrii DFL-11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Roseibium

Description

Roseibium alexandrii DFL-11 is a Gram-negative bacterium characterized by its possession of three replicons. This feature indicates a complex genomic structure, which may contribute to its adaptability and potential metabolic versatility. The organism is documented under the accessions CM011002.1, CM011003.1, and CM011004.1, providing a basis for genomic analysis and further research into its biological functions. As a member of the Roseibium genus, R. alexandrii DFL-11 is likely involved in various ecological processes, particularly in aquatic environments. Gram-negative bacteria are known for their diverse roles in nutrient cycling and interaction with other microorganisms, which can influence ecosystem dynamics. The multiple replicons suggest a capacity for rapid genetic adaptation, enabling R. alexandrii DFL-11 to respond to environmental changes effectively. In summary, the structural attributes of Roseibium alexandrii DFL-11, including its Gram-negative status and the presence of three replicons, highlight its potential ecological significance and adaptability. Further investigation into its metabolic pathways and ecological roles could provide insights into its contributions to microbial communities and biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusRoseibium
SpeciesRoseibium alexandrii
StrainDFL-11

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseibium alexandrii DFL-11, Chromosome

Gene Summary

Adenine Count

1143736 bp

Thymine Count

1166550 bp

Guanine Count

1498323 bp

Cytosine Count

1490641 bp

Genome Length

5300354 bp

Protein-coding Genes

4815 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionine-r-sulfoxide reductaseSADFL11_2679Q8UGX7Negative365645 - 36605515428.9
pas domain s-box/diguanylate cyclase (ggdef) domain proteinSADFL11_426Q55434Negative366123 - 36709734453.5
nadh:ubiquinone oxidoreductase subunit 5 (chain l)/multisubunit na+/h+ antiporter, mnha subunitSADFL11_195Q9RGZ5Positive367586 - 36997084397.3
multisubunit na+/h+ antiporter, mnhb subunitSADFL11_1222O05259Positive369970 - 37038914831.5
multisubunit na+/h+ antiporter, mnhc subunitSADFL11_2123O05260Positive370389 - 37076613652.0
formate hydrogenlyase subunit 3/multisubunit na+/h+ antiporter, mnhd subunitSADFL11_2472Q9RGZ2Positive370773 - 37238956367.6
multisubunit na+/h+ antiporter, mnhe subunitSADFL11_1089Q9RGZ1Positive372389 - 37286517476.4
multisubunit na+/h+ antiporter, mnhf subunitSADFL11_4780Q52965Positive372862 - 37338018386.3
multisubunit na+/h+ antiporter, mnhg subunitSADFL11_2083Q52966Positive373365 - 3735596770.28
putative transcriptional regulatorSADFL11_1253P55324Positive373881 - 37429715375.5

Displaying genes 491 – 500 of 5128 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.