Roseibium alexandrii DFL-11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Roseibium

Description

Roseibium alexandrii DFL-11 is a Gram-negative bacterium characterized by its possession of three replicons. This feature indicates a complex genomic structure, which may contribute to its adaptability and potential metabolic versatility. The organism is documented under the accessions CM011002.1, CM011003.1, and CM011004.1, providing a basis for genomic analysis and further research into its biological functions. As a member of the Roseibium genus, R. alexandrii DFL-11 is likely involved in various ecological processes, particularly in aquatic environments. Gram-negative bacteria are known for their diverse roles in nutrient cycling and interaction with other microorganisms, which can influence ecosystem dynamics. The multiple replicons suggest a capacity for rapid genetic adaptation, enabling R. alexandrii DFL-11 to respond to environmental changes effectively. In summary, the structural attributes of Roseibium alexandrii DFL-11, including its Gram-negative status and the presence of three replicons, highlight its potential ecological significance and adaptability. Further investigation into its metabolic pathways and ecological roles could provide insights into its contributions to microbial communities and biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusRoseibium
SpeciesRoseibium alexandrii
StrainDFL-11

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseibium alexandrii DFL-11, Chromosome

Gene Summary

Adenine Count

1143736 bp

Thymine Count

1166550 bp

Guanine Count

1498323 bp

Cytosine Count

1490641 bp

Genome Length

5300354 bp

Protein-coding Genes

4815 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylacetate-coa oxygenase, paah subunitSADFL11_2001P76078Positive4760745 - 476103210880.9
phenylacetate-coa oxygenase, paai subunitSADFL11_1641P76079Positive4761032 - 476185029863.4
phenylacetate-coa oxygenase, paaj subunitSADFL11_5329P76080Positive4761862 - 476238319024.7
phenylacetate-coa oxygenase/reductase, paak subunitSADFL11_1760P76081Positive4762407 - 476348339796.4
hypothetical proteinSADFL11_821P76077Positive4763473 - 476425228987.6
phenylacetic acid degradation protein paanSADFL11_720P77455Positive4764275 - 476633573403.7
transcriptional regulatorSADFL11_5036A0R4Z6Negative4766386 - 476698522415.0
phenylacetate-coa ligaseSADFL11_1386Q9L9C1Negative4767117 - 476842748549.0
phenylacetic acid degradation protein paadSADFL11_3618P76084Negative4768464 - 476891016100.1
phenylacetate degradation probable enoyl-coa hydratase paabSADFL11_2308P77467Negative4768912 - 476970628376.9

Displaying genes 4481 – 4490 of 5128 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.