Roseibium alexandrii DFL-11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Roseibium

Description

Roseibium alexandrii DFL-11 is a Gram-negative bacterium characterized by its possession of three replicons. This feature indicates a complex genomic structure, which may contribute to its adaptability and potential metabolic versatility. The organism is documented under the accessions CM011002.1, CM011003.1, and CM011004.1, providing a basis for genomic analysis and further research into its biological functions. As a member of the Roseibium genus, R. alexandrii DFL-11 is likely involved in various ecological processes, particularly in aquatic environments. Gram-negative bacteria are known for their diverse roles in nutrient cycling and interaction with other microorganisms, which can influence ecosystem dynamics. The multiple replicons suggest a capacity for rapid genetic adaptation, enabling R. alexandrii DFL-11 to respond to environmental changes effectively. In summary, the structural attributes of Roseibium alexandrii DFL-11, including its Gram-negative status and the presence of three replicons, highlight its potential ecological significance and adaptability. Further investigation into its metabolic pathways and ecological roles could provide insights into its contributions to microbial communities and biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusRoseibium
SpeciesRoseibium alexandrii
StrainDFL-11

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseibium alexandrii DFL-11, Chromosome

Gene Summary

Adenine Count

1143736 bp

Thymine Count

1166550 bp

Guanine Count

1498323 bp

Cytosine Count

1490641 bp

Genome Length

5300354 bp

Protein-coding Genes

4815 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily)SADFL11_3117Q59695Negative4345925 - 434672228698.9
adenylate cyclase, family 3 (some protein containing hamp domain)SADFL11_4918Q55F68Negative4346922 - 434797439673.1
hypothetical proteinSADFL11_446Not AvailableNegative4348018 - 434953856585.8
putative membrane proteinSADFL11_2820Not AvailableNegative4349556 - 434999315816.6
glycosyltransferase involved in cell wall biogenesisSADFL11_1824Q55487Negative4349977 - 435093635792.3
preprotein translocase, seca subunitSADFL11_273A7ICM7Negative4351182 - 4353950103654.0
parvulin-like peptidyl-prolyl isomeraseSADFL11_4591A1VYV6Positive4354220 - 435508331550.3
glutamate n-acetyltransferase/amino-acid acetyltransferaseSADFL11_5232Q92MJ1Positive4355233 - 435647442985.8
adp-ribose pyrophosphataseSADFL11_5058P77788Positive4356546 - 435694714953.2
flp pilus assembly protein, pilin flpSADFL11_2552Not AvailablePositive4356975 - 43571937847.55

Displaying genes 4101 – 4110 of 5128 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.