Roseibium alexandrii DFL-11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Roseibium

Description

Roseibium alexandrii DFL-11 is a Gram-negative bacterium characterized by its possession of three replicons. This feature indicates a complex genomic structure, which may contribute to its adaptability and potential metabolic versatility. The organism is documented under the accessions CM011002.1, CM011003.1, and CM011004.1, providing a basis for genomic analysis and further research into its biological functions. As a member of the Roseibium genus, R. alexandrii DFL-11 is likely involved in various ecological processes, particularly in aquatic environments. Gram-negative bacteria are known for their diverse roles in nutrient cycling and interaction with other microorganisms, which can influence ecosystem dynamics. The multiple replicons suggest a capacity for rapid genetic adaptation, enabling R. alexandrii DFL-11 to respond to environmental changes effectively. In summary, the structural attributes of Roseibium alexandrii DFL-11, including its Gram-negative status and the presence of three replicons, highlight its potential ecological significance and adaptability. Further investigation into its metabolic pathways and ecological roles could provide insights into its contributions to microbial communities and biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusRoseibium
SpeciesRoseibium alexandrii
StrainDFL-11

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseibium alexandrii DFL-11, Chromosome

Gene Summary

Adenine Count

1143736 bp

Thymine Count

1166550 bp

Guanine Count

1498323 bp

Cytosine Count

1490641 bp

Genome Length

5300354 bp

Protein-coding Genes

4815 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosomal rna small subunit methyltransferase rsmbSADFL11_2158B7MCQ4Positive3921756 - 392313249357.1
uncharacterized proteinSADFL11_1845A0A0H3C3S1Positive3923271 - 392508566335.5
phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseSADFL11_4418A6WXV3Positive3925185 - 392680156652.6
methyl-accepting chemotaxis proteinSADFL11_3835Q2W4T8Positive3926967 - 392907274855.9
permease of the major facilitator superfamilySADFL11_1286P42306Negative3929108 - 393049048702.3
nad-specific glutamate dehydrogenaseSADFL11_4291Q9HZE0Negative3930645 - 3935456179708.0
putative peroxidase-related enzymeSADFL11_1011Not AvailablePositive3935549 - 393611520968.1
n-acetyl-gamma-glutamyl-phosphate reductase, uncommon formSADFL11_328Q11J68Positive3936210 - 393716033346.7
3-isopropylmalate dehydratase, small subunitSADFL11_2751Q98E51Positive3937199 - 393780422415.8
uncharacterized proteinSADFL11_845Not AvailableNegative3937877 - 393841620179.5

Displaying genes 3671 – 3680 of 5128 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.