Roseibium alexandrii DFL-11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Roseibium

Description

Roseibium alexandrii DFL-11 is a Gram-negative bacterium characterized by its possession of three replicons. This feature indicates a complex genomic structure, which may contribute to its adaptability and potential metabolic versatility. The organism is documented under the accessions CM011002.1, CM011003.1, and CM011004.1, providing a basis for genomic analysis and further research into its biological functions. As a member of the Roseibium genus, R. alexandrii DFL-11 is likely involved in various ecological processes, particularly in aquatic environments. Gram-negative bacteria are known for their diverse roles in nutrient cycling and interaction with other microorganisms, which can influence ecosystem dynamics. The multiple replicons suggest a capacity for rapid genetic adaptation, enabling R. alexandrii DFL-11 to respond to environmental changes effectively. In summary, the structural attributes of Roseibium alexandrii DFL-11, including its Gram-negative status and the presence of three replicons, highlight its potential ecological significance and adaptability. Further investigation into its metabolic pathways and ecological roles could provide insights into its contributions to microbial communities and biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusRoseibium
SpeciesRoseibium alexandrii
StrainDFL-11

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseibium alexandrii DFL-11, Chromosome

Gene Summary

Adenine Count

1143736 bp

Thymine Count

1166550 bp

Guanine Count

1498323 bp

Cytosine Count

1490641 bp

Genome Length

5300354 bp

Protein-coding Genes

4815 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclase (ggdef) domain proteinSADFL11_2262P55552Negative2509410 - 251190591056.4
response regulatorSADFL11_332A8R3T0Negative2512122 - 251280224430.4
putative thioesteraseSADFL11_5221Not AvailablePositive2513269 - 251413831913.8
hypothetical proteinSADFL11_1177Not AvailableNegative2514176 - 251471519243.4
atp-dependent dna ligaseSADFL11_4500Q1II25Negative2514836 - 251650062416.3
hypothetical proteinSADFL11_1186Not AvailableNegative2516586 - 251694513475.9
methyl-accepting chemotaxis proteinSADFL11_5309Q2W4T8Negative2516921 - 251868763287.0
hypothetical proteinSADFL11_2768Not AvailableNegative2518662 - 25189048556.64
superfamily ii dna and rna helicaseSADFL11_4762Q0ILZ4Positive2519144 - 252131279054.7
outer membrane protein vSADFL11_2508Q9AB80Negative2521371 - 252221629842.3

Displaying genes 2391 – 2400 of 5128 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.