Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Roseibium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Roseibium |
| Species | Roseibium alexandrii |
| Strain | DFL-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1143736 bp
Thymine Count
1166550 bp
Guanine Count
1498323 bp
Cytosine Count
1490641 bp
Genome Length
5300354 bp
Protein-coding Genes
4815 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphoesterase | SADFL11_5126 | Q58322 | Positive | 2433421 - 2434191 | 28345.5 |
| udp-glucose-4-epimerase | SADFL11_2369 | P55180 | Negative | 2434195 - 2435226 | 37299.9 |
| 3''(2''),5''-bisphosphate nucleotidase, bacterial | SADFL11_215 | P26264 | Negative | 2435322 - 2436167 | 29553.3 |
| hydrogenase nickel insertion protein hypa | SADFL11_3055 | B7JBG5 | Positive | 2436519 - 2436860 | 12069.4 |
| hydrogenase accessory protein hypb | SADFL11_3480 | P31880 | Positive | 2436860 - 2437684 | 29514.8 |
| hydrogenase assembly chaperone hypc/hupf | SADFL11_1569 | P31900 | Positive | 2437694 - 2437948 | 8953.81 |
| hydrogenase expression/formation protein hypd | SADFL11_1473 | P31904 | Positive | 2437945 - 2439099 | 42531.2 |
| hydrogenase expression/formation protein hype | SADFL11_3519 | P31905 | Positive | 2439096 - 2440133 | 35677.0 |
| [nife] hydrogenase maturation protein hypf | SADFL11_984 | Q02987 | Positive | 2440145 - 2442466 | 82455.8 |
| homocysteine/selenocysteine methylase (s-methylmethionine-dependent) | SADFL11_2496 | Q47690 | Negative | 2442489 - 2443373 | 31437.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
