Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 10595249 - 10595322 | Not Available |
| sigma-70 family rna polymerase sigma factor | ISP_009584 | B1W3T1 | Negative | 10595527 - 10596303 | 28485.8 |
| hypothetical protein | ISP_009585 | Not Available | Negative | 10597073 - 10597303 | 8250.84 |
| site-specific integrase | ISP_009586 | P15435 | Negative | 10597987 - 10599174 | 43724.5 |
| helix-turn-helix domain-containing protein | ISP_009587 | P22876 | Negative | 10599158 - 10599388 | 8661.7 |
| duf3631 domain-containing protein | ISP_009588 | P22875 | Negative | 10599385 - 10600941 | 56098.9 |
| hypothetical protein | ISP_009589 | Not Available | Negative | 10600941 - 10601381 | 16317.2 |
| hypothetical protein | ISP_009590 | Not Available | Positive | 10601498 - 10601743 | 9040.94 |
| scr1 family ta system antitoxin-like transcriptional regulator | ISP_009591 | Not Available | Negative | 10601795 - 10602592 | 29200.9 |
| hypothetical protein | ISP_009592 | Not Available | Negative | 10602589 - 10602855 | 9485.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
