Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation diffusion facilitator family transporter | ISP_008043 | P13512 | Negative | 8922097 - 8923017 | 31808.1 |
| marr family transcriptional regulator | ISP_008044 | O07458 | Negative | 8923171 - 8923590 | 15192.5 |
| sdr family oxidoreductase | ISP_008045 | P51656 | Positive | 8923697 - 8924533 | 28780.1 |
| epoxide hydrolase | ISP_008046 | Q06816 | Negative | 8924530 - 8925630 | 40646.5 |
| Trna-arg | Not Available | Not Available | Positive | 8925781 - 8925853 | Not Available |
| tyrosine-type recombinase/integrase | ISP_008048 | Not Available | Negative | 8925984 - 8926712 | 26790.7 |
| nad(p)-dependent alcohol dehydrogenase | ISP_008049 | K4BW79 | Positive | 8926949 - 8927833 | 31734.1 |
| hypothetical protein | ISP_008050 | Not Available | Negative | 8928028 - 8928207 | 6578.13 |
| tigr03086 family metal-binding protein | ISP_008051 | P9WKS2 | Negative | 8928938 - 8929507 | 19925.5 |
| helix-turn-helix domain-containing protein | ISP_008052 | P43458 | Positive | 8929572 - 8930315 | 27999.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
