Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368

Gram-positiveFilamentousNon-motileAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis mediterranei, specifically the strains Lepetit ME/83, Lepetit ME83/973, and Schering 368, are notable for their habitat in soil environments. These microorganisms are characterized as Gram-positive and possess a filamentous shape, which is typical for many members of the Actinobacteria phylum. They are strictly aerobic, requiring oxygen for growth, and they do not exhibit mobility, meaning they do not move independently within their environment. The presence of flagella in these strains is noteworthy, as it is commonly associated with motility; however, in this case, it may play a role in surface attachment or other ecological interactions rather than in locomotion. These strains are classified as mesophilic, indicating they thrive in moderate temperature ranges, which is typical for soil-dwelling microorganisms. Additionally, Amycolatopsis mediterranei has only one replicon, suggesting a relatively simple genetic structure, which may facilitate genetic stability in natural environments. The accession number for this organism is CP100416.1, which provides a reference for genetic studies. In terms of ecological insight, the filamentous structure and aerobic nature of Amycolatopsis mediterranei suggest that these organisms play a significant role in soil ecosystems, potentially contributing to the breakdown of organic materials and nutrient cycling. Their adaptation to soil habitats and mesophilic conditions indicates their importance in maintaining soil health and supporting biodiversity.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis mediterranei
StrainLepetit ME/83, Lepetit ME83/973, Schering 368

Profile

Physiology
Gram staining propertiesPositive
ShapeFilamentous
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome

Gene Summary

Adenine Count

1464516 bp

Thymine Count

1458769 bp

Guanine Count

3632108 bp

Cytosine Count

3642717 bp

Genome Length

10606055 bp

Protein-coding Genes

9533 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l31ISP_008033A4FN40Negative8910770 - 89110008501.05
transcription termination factor rhoISP_008034P66029Negative8911183 - 891318672245.5
homoserine kinaseISP_008035Q5Z0Z5Negative8913597 - 891448129669.4
threonine synthaseISP_008036A0R220Negative8914478 - 891553936549.7
homoserine dehydrogenaseISP_008037P63630Negative8915536 - 891686145492.0
diaminopimelate decarboxylaseISP_008038Q9X5M1Negative8916868 - 891829851150.6
arginine--trna ligaseISP_008039A4FN47Negative8918302 - 891996359547.4
duf3105 domain-containing proteinISP_008040Not AvailablePositive8920160 - 892097828503.7
duf305 domain-containing proteinISP_008041Not AvailablePositive8920975 - 892168825629.9
hypothetical proteinISP_008042Not AvailableNegative8921692 - 892203011479.6

Displaying genes 8031 – 8040 of 9594 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.