Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismatase family protein | ISP_007963 | I6XD65 | Positive | 8848479 - 8849057 | 19568.6 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | ISP_007964 | P50846 | Positive | 8849054 - 8849698 | 21470.9 |
| hypothetical protein | ISP_007965 | Not Available | Negative | 8849700 - 8850347 | 21861.9 |
| biotin transporter bioy | ISP_007966 | O57898 | Positive | 8850529 - 8851116 | 19408.1 |
| atp-dependent dna helicase | ISP_007967 | P64315 | Positive | 8851210 - 8853270 | 73529.7 |
| hypothetical protein | ISP_007968 | Not Available | Positive | 8853329 - 8853670 | 12111.9 |
| hypothetical protein | ISP_007969 | Not Available | Positive | 8853672 - 8853923 | 9355.3 |
| osmc family protein | ISP_007970 | P9WL18 | Negative | 8853920 - 8854321 | 14125.6 |
| peptidyl-trna hydrolase | ISP_007971 | Q5V1D3 | Negative | 8854338 - 8855117 | 27704.1 |
| phosphoserine phosphatase serb | ISP_007972 | O53289 | Negative | 8855114 - 8856343 | 43190.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
