Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_007913 | Not Available | Negative | 8802079 - 8802351 | 9621.79 |
| metallophosphoesterase | ISP_007914 | Q08BG1 | Positive | 8802422 - 8803543 | 39941.5 |
| alpha/beta hydrolase | ISP_007915 | Q8NUP5 | Positive | 8803631 - 8804425 | 28208.9 |
| o-acetyl-adp-ribose deacetylase | ISP_007916 | Q9ZBG3 | Positive | 8804455 - 8804973 | 18017.7 |
| had family hydrolase | ISP_007917 | P54607 | Positive | 8805002 - 8805649 | 22978.3 |
| nudix domain-containing protein | ISP_007918 | Q1I3C2 | Negative | 8805639 - 8806106 | 16885.1 |
| doxx family protein | ISP_007919 | P44069 | Positive | 8806218 - 8806655 | 15309.9 |
| atp/gtp-binding protein | ISP_007920 | O26859 | Negative | 8806671 - 8807273 | 21679.8 |
| duf742 domain-containing protein | ISP_007921 | Not Available | Negative | 8807254 - 8807625 | 13495.5 |
| roadblock/lc7 domain-containing protein | ISP_007922 | O50393 | Negative | 8807622 - 8808041 | 14564.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
