Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | ISP_007863 | P32010 | Positive | 8759832 - 8760761 | 31992.8 |
| abc transporter permease | ISP_007864 | P32011 | Positive | 8760773 - 8761606 | 29309.4 |
| glycosyl transferase | ISP_007865 | Not Available | Negative | 8761603 - 8761992 | 13201.7 |
| is30 family transposase | ISP_007866 | Not Available | Positive | 8762057 - 8762137 | 2985.46 |
| hypothetical protein | ISP_007867 | Not Available | Positive | 8762253 - 8762468 | 7365.94 |
| chat domain-containing protein | ISP_007868 | Not Available | Negative | 8762465 - 8765074 | 93342.8 |
| hypothetical protein | ISP_007869 | Not Available | Negative | 8765168 - 8765326 | 5618.44 |
| beta-lactamase family protein | ISP_007870 | Q09621 | Negative | 8765663 - 8766802 | 40111.2 |
| hypothetical protein | ISP_007871 | Not Available | Positive | 8766907 - 8767326 | 14301.5 |
| voc family protein | ISP_007872 | Not Available | Positive | 8767357 - 8767722 | 13198.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
