Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | ISP_007843 | O32138 | Negative | 8740343 - 8740669 | 12161.0 |
| is30 family transposase | ISP_007844 | Not Available | Negative | 8740650 - 8740832 | 5955.08 |
| helix-turn-helix domain-containing protein | ISP_007845 | O32138 | Positive | 8741754 - 8742956 | 43057.7 |
| alpha/beta fold hydrolase | ISP_007846 | P9WNH2 | Positive | 8743362 - 8744279 | 32352.3 |
| helix-turn-helix domain-containing protein | ISP_007847 | P9WPH4 | Positive | 8744496 - 8745860 | 49973.0 |
| helix-turn-helix domain-containing protein | ISP_007848 | Not Available | Positive | 8745887 - 8747080 | 43245.3 |
| kr domain-containing protein | ISP_007849 | Q7TXL7 | Negative | 8747189 - 8748316 | 39434.1 |
| hypothetical protein | ISP_007850 | Not Available | Negative | 8748310 - 8748474 | 5859.24 |
| hypothetical protein | ISP_007851 | P9WM00 | Negative | 8748490 - 8749065 | 20046.9 |
| hypothetical protein | ISP_007852 | Not Available | Negative | 8749062 - 8749559 | 17074.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
