Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | ISP_007803 | P16640 | Positive | 8699700 - 8700833 | 38796.4 |
| hypothetical protein | ISP_007804 | Not Available | Positive | 8700872 - 8701393 | 17817.2 |
| alpha/beta hydrolase | ISP_007805 | O52866 | Negative | 8701425 - 8702363 | 33384.6 |
| tetr/acrr family transcriptional regulator | ISP_007806 | P75952 | Positive | 8702448 - 8703068 | 21853.9 |
| hypothetical protein | ISP_007807 | Not Available | Negative | 8703065 - 8704039 | 35453.3 |
| hypothetical protein | ISP_007808 | Not Available | Negative | 8704036 - 8704584 | 19358.7 |
| 2-oxo acid dehydrogenase subunit e2 | ISP_007809 | Q6ABX9 | Negative | 8704640 - 8705815 | 40695.1 |
| alpha-ketoacid dehydrogenase subunit beta | ISP_007810 | P9WIS0 | Negative | 8705808 - 8706803 | 35830.5 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | ISP_007811 | P9WIS2 | Negative | 8706803 - 8707879 | 39006.9 |
| lrp/asnc family transcriptional regulator | ISP_007812 | Q9V2D7 | Positive | 8707966 - 8708499 | 19093.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
