Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit beta family protein | ISP_007793 | P40875 | Negative | 8687703 - 8688914 | 43224.5 |
| serine hydroxymethyltransferase | ISP_007794 | Q82JI0 | Negative | 8688911 - 8690164 | 44969.7 |
| gntr family transcriptional regulator | ISP_007795 | Q8FHD1 | Positive | 8690231 - 8690878 | 23687.6 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | ISP_007796 | D0C9N6 | Negative | 8690888 - 8692009 | 41346.1 |
| tetr family transcriptional regulator | ISP_007797 | P75811 | Negative | 8692284 - 8692862 | 20815.7 |
| aldehyde dehydrogenase family protein | ISP_007798 | P71016 | Positive | 8692960 - 8694375 | 50344.6 |
| amino acid permease | ISP_007799 | B9EXZ6 | Positive | 8694409 - 8695977 | 55546.4 |
| choline dehydrogenase | ISP_007800 | Q6G664 | Positive | 8695986 - 8697644 | 61089.4 |
| transposase | ISP_007801 | Not Available | Positive | 8698842 - 8699179 | 11862.3 |
| bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | ISP_007802 | Q7N4V8 | Positive | 8699383 - 8699703 | 11273.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
