Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | ISP_007783 | P96684 | Positive | 8674151 - 8674612 | 16700.0 |
| mfs transporter | ISP_007784 | P42670 | Positive | 8674609 - 8676009 | 46431.2 |
| mfs transporter | ISP_007785 | P42670 | Negative | 8676126 - 8677583 | 50158.0 |
| marr family transcriptional regulator | ISP_007786 | P70993 | Positive | 8677670 - 8678044 | 14081.8 |
| s1c family serine protease | ISP_007787 | O53896 | Negative | 8679596 - 8680972 | 46704.2 |
| fad-dependent oxidoreductase | ISP_007788 | Q9AGP8 | Negative | 8681067 - 8683493 | 87914.3 |
| formyltetrahydrofolate deformylase | ISP_007789 | Q46339 | Negative | 8683518 - 8684360 | 31157.2 |
| sarcosine oxidase subunit gamma | ISP_007790 | Q46338 | Negative | 8684357 - 8684875 | 18587.2 |
| 2fe-2s iron-sulfur cluster-binding protein | ISP_007791 | Q46337 | Negative | 8684865 - 8687402 | 91337.7 |
| sarcosine oxidase subunit delta | ISP_007792 | Q46336 | Negative | 8687399 - 8687677 | 10648.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
