Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_007773 | Not Available | Negative | 8660285 - 8660467 | 5987.25 |
| hypothetical protein | ISP_007774 | Not Available | Negative | 8660471 - 8662153 | 58288.6 |
| polysaccharide biosynthesis protein | ISP_007775 | Not Available | Positive | 8662224 - 8663438 | 41100.4 |
| is30 family transposase | ISP_007776 | Not Available | Positive | 8664030 - 8664128 | 3394.0 |
| is30 family transposase | ISP_007777 | P96419 | Negative | 8665267 - 8667381 | 75381.6 |
| class i sam-dependent methyltransferase | ISP_007778 | K5B7F3 | Positive | 8667645 - 8668319 | 25169.4 |
| glycosyltransferase family 39 protein | ISP_007779 | Not Available | Negative | 8668313 - 8670052 | 62226.1 |
| substrate-binding and vwa domain-containing protein | ISP_007780 | P9WLQ8 | Negative | 8670067 - 8671647 | 55152.8 |
| hypothetical protein | ISP_007781 | Not Available | Positive | 8671917 - 8672699 | 27686.4 |
| plp-dependent aminotransferase family protein | ISP_007782 | Q8NS92 | Negative | 8672703 - 8674103 | 49946.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
