Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | ISP_007753 | P9WL22 | Negative | 8641961 - 8643010 | 36659.4 |
| eal domain-containing protein | ISP_007754 | Q9I310 | Positive | 8643148 - 8645460 | 81899.3 |
| cyclase family protein | ISP_007755 | A0NLY7 | Negative | 8645496 - 8646323 | 29354.6 |
| duf5709 domain-containing protein | ISP_007756 | Not Available | Positive | 8646488 - 8646913 | 15025.2 |
| is30 family transposase | ISP_007757 | Not Available | Negative | 8646979 - 8647224 | 9212.25 |
| is30 family transposase | ISP_007758 | P9WJX6 | Positive | 8647230 - 8648046 | 28607.0 |
| glycoside hydrolase family 18 protein | ISP_007759 | P36909 | Negative | 8648098 - 8649291 | 41668.8 |
| hypothetical protein | ISP_007760 | Not Available | Positive | 8649445 - 8649837 | 14194.6 |
| pyridoxal-dependent decarboxylase | ISP_007761 | Q6ZJK7 | Negative | 8649831 - 8651216 | 47318.9 |
| gnat family n-acetyltransferase | ISP_007762 | Q7VG78 | Positive | 8651606 - 8652139 | 19918.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
