Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate reductase | ISP_007743 | C1FW05 | Positive | 8634099 - 8635175 | 37804.0 |
| gmc oxidoreductase | ISP_007744 | P22637 | Negative | 8635879 - 8637450 | 55482.8 |
| rna-binding s4 domain-containing protein | ISP_007745 | P44754 | Positive | 8637660 - 8638028 | 13580.3 |
| hypothetical protein | ISP_007746 | Not Available | Negative | 8638025 - 8638222 | 6924.98 |
| is30 family transposase | ISP_007747 | P66812 | Positive | 8638326 - 8638532 | 7597.13 |
| is30 family transposase | ISP_007748 | P66812 | Positive | 8638871 - 8639131 | 9289.27 |
| cupin domain-containing protein | ISP_007749 | Q59013 | Positive | 8639148 - 8639450 | 10914.7 |
| rna polymerase sigma factor shba | ISP_007750 | P66812 | Negative | 8639455 - 8640090 | 22393.0 |
| hypothetical protein | ISP_007751 | Not Available | Negative | 8640325 - 8641116 | 29557.5 |
| hypothetical protein | ISP_007752 | Not Available | Positive | 8641624 - 8641800 | 6046.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
