Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | ISP_007723 | Q95LV1 | Negative | 8611890 - 8613644 | 64000.9 |
| alpha-l-arabinofuranosidase | ISP_007724 | P53627 | Negative | 8613637 - 8615181 | 55841.6 |
| sugar abc transporter substrate-binding protein | ISP_007725 | P94528 | Negative | 8615178 - 8616518 | 47035.8 |
| carbohydrate abc transporter permease | ISP_007726 | Q9KEE9 | Negative | 8616568 - 8617431 | 31025.5 |
| sugar abc transporter permease | ISP_007727 | P29823 | Negative | 8617433 - 8618359 | 33907.0 |
| laci family dna-binding transcriptional regulator | ISP_007728 | P03023 | Positive | 8618471 - 8619526 | 37340.1 |
| hypothetical protein | ISP_007729 | Not Available | Positive | 8620168 - 8620353 | 6481.29 |
| dsba family oxidoreductase | ISP_007730 | P39598 | Negative | 8620328 - 8620966 | 23322.1 |
| qsdr family transcriptional regulator | ISP_007731 | Not Available | Positive | 8621189 - 8621788 | 21687.2 |
| alpha/beta hydrolase | ISP_007732 | Q6A0I4 | Positive | 8621986 - 8622915 | 32379.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
