Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferritin | ISP_007703 | A0R647 | Positive | 8590965 - 8591501 | 20256.1 |
| paai family thioesterase | ISP_007704 | Q6GLK2 | Positive | 8591616 - 8592263 | 21991.3 |
| signal protein | ISP_007705 | Q9I310 | Negative | 8592293 - 8593069 | 27144.0 |
| atp/gtp-binding protein | ISP_007706 | Q58735 | Negative | 8593088 - 8593627 | 19288.1 |
| duf742 domain-containing protein | ISP_007707 | Not Available | Negative | 8593716 - 8594093 | 13390.1 |
| roadblock/lc7 domain-containing protein | ISP_007708 | O50393 | Negative | 8594090 - 8594524 | 14843.8 |
| hamp domain-containing protein | ISP_007709 | Not Available | Negative | 8594521 - 8596716 | 76752.2 |
| winged helix-turn-helix domain-containing protein | ISP_007710 | Not Available | Positive | 8597091 - 8598050 | 34849.9 |
| hypothetical protein | ISP_007711 | Not Available | Positive | 8598247 - 8598516 | 9411.5 |
| nad-dependent epimerase/dehydratase family protein | ISP_007712 | D4GP33 | Negative | 8598513 - 8599535 | 36675.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
