Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulose binding domain-containing protein | ISP_007683 | P27035 | Negative | 8566590 - 8566886 | 10646.4 |
| fibronectin type iii domain-containing protein | ISP_007684 | B0XQB2 | Negative | 8566790 - 8568622 | 63064.3 |
| error-prone dna polymerase | ISP_007685 | Q5Z1D1 | Negative | 8568703 - 8572029 | 120102.0 |
| rna polymerase sigma factor | ISP_007686 | Q52997 | Negative | 8572161 - 8573366 | 42818.3 |
| ycii family protein | ISP_007687 | Q52996 | Negative | 8573363 - 8573725 | 12989.5 |
| dihydrofolate reductase family protein | ISP_007688 | Not Available | Negative | 8573741 - 8574466 | 25749.7 |
| arginine decarboxylase | ISP_007689 | P28629 | Negative | 8574562 - 8576853 | 82683.7 |
| dna polymerase y family protein | ISP_007690 | A3CSG3 | Negative | 8576999 - 8578579 | 55571.6 |
| hypothetical protein | ISP_007691 | P9WKZ8 | Negative | 8578778 - 8579455 | 22711.7 |
| class i sam-dependent methyltransferase | ISP_007692 | Q0RES2 | Negative | 8579576 - 8580493 | 33104.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
