Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator c-terminal domain-containing protein | ISP_007663 | P03038 | Positive | 8549242 - 8549910 | 23893.8 |
| alpha/beta hydrolase | ISP_007664 | O07015 | Positive | 8549967 - 8550761 | 28482.7 |
| spoiie family protein phosphatase | ISP_007665 | O07014 | Positive | 8550821 - 8551990 | 41695.5 |
| stas domain-containing protein | ISP_007666 | Q9WVX8 | Positive | 8551987 - 8552331 | 11278.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | ISP_007667 | O86841 | Negative | 8552683 - 8553519 | 28764.9 |
| lysr substrate-binding domain-containing protein | ISP_007668 | P52691 | Positive | 8553592 - 8554551 | 33558.7 |
| class i sam-dependent methyltransferase | ISP_007669 | E5KIC0 | Negative | 8554505 - 8555227 | 26217.2 |
| hypothetical protein | ISP_007670 | Not Available | Positive | 8555322 - 8555594 | 10185.4 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | ISP_007671 | Q72HF4 | Positive | 8555606 - 8557429 | 64762.4 |
| bnr repeat-containing protein | ISP_007672 | P9WF07 | Negative | 8557441 - 8558871 | 50775.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
