Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | ISP_007643 | Q6LZC4 | Negative | 8524096 - 8525271 | 41632.9 |
| lysyl oxidase family protein | ISP_007644 | F1QQC3 | Positive | 8525434 - 8526375 | 33046.1 |
| meds domain-containing protein | ISP_007645 | Not Available | Negative | 8526332 - 8527096 | 26351.9 |
| voc family protein | ISP_007646 | Not Available | Negative | 8527243 - 8527620 | 13820.2 |
| right-handed parallel beta-helix repeat-containing protein | ISP_007647 | P0C1A6 | Negative | 8527749 - 8529065 | 45987.8 |
| glycoside hydrolase family 2 | ISP_007648 | A7LXS9 | Negative | 8529080 - 8531272 | 76122.3 |
| rhamnogalacturonan lyase | ISP_007649 | O31526 | Negative | 8531272 - 8533095 | 64683.3 |
| rhamnogalacturonan acetylesterase | ISP_007650 | O31523 | Negative | 8533115 - 8534170 | 35738.8 |
| cellulase family glycosylhydrolase | ISP_007651 | P51529 | Negative | 8534209 - 8536476 | 78098.9 |
| arabinogalactan endo-1,4-beta-galactosidase | ISP_007652 | P48843 | Negative | 8536646 - 8537818 | 41656.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
