Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 9 protein | ISP_007623 | Q05156 | Negative | 8500831 - 8503710 | 99474.2 |
| ricin-type beta-trefoil lectin domain protein | ISP_007624 | B3PGJ1 | Positive | 8503952 - 8505580 | 57054.6 |
| hypothetical protein | ISP_007625 | Not Available | Positive | 8505865 - 8506098 | 8186.78 |
| hypothetical protein | ISP_007626 | Not Available | Negative | 8506361 - 8506714 | 11574.6 |
| antar domain-containing protein | ISP_007627 | Not Available | Negative | 8507125 - 8507481 | 11951.1 |
| hypothetical protein | ISP_007628 | Not Available | Negative | 8507562 - 8507912 | 11358.2 |
| hypothetical protein | ISP_007629 | Not Available | Negative | 8508019 - 8508387 | 12030.0 |
| hypothetical protein | ISP_007630 | Not Available | Positive | 8508811 - 8509647 | 26932.5 |
| polysaccharide deacetylase family protein | ISP_007631 | P04675 | Positive | 8509644 - 8510609 | 34894.8 |
| o-antigen ligase family protein | ISP_007632 | Not Available | Positive | 8510606 - 8511841 | 42653.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
