Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-binding dehydrogenase | ISP_007613 | O31186 | Negative | 8487364 - 8488449 | 37282.9 |
| lysr family transcriptional regulator | ISP_007614 | P52677 | Positive | 8488541 - 8489440 | 30729.2 |
| ricin domain-containing protein | ISP_007615 | P12265 | Positive | 8489720 - 8492776 | 107655.0 |
| duf6204 family protein | ISP_007616 | Not Available | Negative | 8492878 - 8493192 | 11611.8 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | ISP_007617 | Q56078 | Positive | 8493324 - 8495585 | 78429.3 |
| tigr01777 family oxidoreductase | ISP_007618 | P9WGP6 | Negative | 8495633 - 8496724 | 38375.8 |
| ubp-type zinc finger domain-containing protein | ISP_007619 | Not Available | Negative | 8497406 - 8497756 | 12485.2 |
| glycoside hydrolase family 5 protein | ISP_007620 | O08342 | Positive | 8497997 - 8499196 | 43452.9 |
| abc transporter permease | ISP_007621 | P0AFQ4 | Negative | 8499215 - 8499940 | 25889.8 |
| abc transporter atp-binding protein | ISP_007622 | P37624 | Negative | 8499937 - 8500662 | 25721.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
