Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | ISP_007573 | D8I5S8 | Positive | 8430549 - 8431511 | 35456.6 |
| sdr family oxidoreductase | ISP_007574 | Q9WYG0 | Positive | 8431514 - 8432263 | 25412.3 |
| helix-turn-helix domain-containing protein | ISP_007575 | P06134 | Negative | 8432303 - 8433193 | 32885.7 |
| cytochrome p450 | ISP_007576 | Q84HB6 | Negative | 8433403 - 8434671 | 46359.3 |
| rna polymerase subunit sigma-70 | ISP_007577 | P9WGG4 | Positive | 8435093 - 8435809 | 26644.8 |
| fad-binding protein | ISP_007578 | Q0PCD7 | Negative | 8435934 - 8437460 | 56227.4 |
| llm class f420-dependent oxidoreductase | ISP_007579 | Q65YW9 | Positive | 8437977 - 8438924 | 34648.1 |
| dihydrofolate reductase family protein | ISP_007580 | P37508 | Positive | 8439013 - 8439588 | 20794.0 |
| mfs transporter | ISP_007581 | P42670 | Negative | 8439697 - 8441163 | 50175.4 |
| hypothetical protein | ISP_007582 | Not Available | Positive | 8441734 - 8442279 | 18932.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
