Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | ISP_007563 | Q8G2M8 | Negative | 8424065 - 8424673 | 21311.4 |
| srpbcc family protein | ISP_007564 | Not Available | Positive | 8424825 - 8425229 | 15117.8 |
| is30 family transposase | ISP_007565 | Not Available | Negative | 8425230 - 8425387 | 5898.95 |
| nad(p)h-binding protein | ISP_007566 | O31512 | Negative | 8425413 - 8426264 | 29541.3 |
| helix-turn-helix domain-containing protein | ISP_007567 | O31480 | Positive | 8426379 - 8426693 | 11465.1 |
| hypothetical protein | ISP_007568 | Not Available | Negative | 8426815 - 8427084 | 9827.27 |
| nad(p)h-binding protein | ISP_007569 | B1VN94 | Negative | 8427241 - 8428113 | 30517.6 |
| sgcj/ecac family oxidoreductase | ISP_007570 | Not Available | Negative | 8428346 - 8428783 | 15723.4 |
| hypothetical protein | ISP_007571 | Not Available | Negative | 8428974 - 8429528 | 20728.8 |
| is30 family transposase | ISP_007572 | Q5YQD7 | Negative | 8429677 - 8430152 | 16993.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
