Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication-relaxation family protein | ISP_007523 | Not Available | Negative | 8381031 - 8381885 | 31823.6 |
| type iv secretory system conjugative dna transfer family protein | ISP_007524 | Not Available | Negative | 8381891 - 8384065 | 79609.7 |
| lsr2 family protein | ISP_007525 | P65649 | Positive | 8384272 - 8384676 | 14434.8 |
| hypothetical protein | ISP_007526 | Not Available | Negative | 8384714 - 8385346 | 22314.6 |
| hypothetical protein | ISP_007527 | Not Available | Negative | 8386493 - 8386918 | 15611.2 |
| duf6531 domain-containing protein | ISP_007528 | P0DUH5 | Negative | 8386969 - 8391567 | 156249.0 |
| bifunctional lytic transglycosylase/c40 family peptidase | ISP_007529 | Q01836 | Negative | 8392431 - 8393426 | 34619.1 |
| hypothetical protein | ISP_007530 | Not Available | Negative | 8393423 - 8395507 | 73850.7 |
| atp-binding protein | ISP_007531 | Not Available | Negative | 8395560 - 8398127 | 92929.4 |
| hypothetical protein | ISP_007532 | Not Available | Negative | 8398139 - 8398519 | 13974.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
