Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | ISP_007503 | Not Available | Negative | 8362714 - 8363349 | 23376.0 |
| coa transferase | ISP_007504 | Q7CXU0 | Negative | 8363402 - 8364583 | 42255.3 |
| glutathione s-transferase | ISP_007505 | P0ACA2 | Negative | 8364580 - 8365227 | 23991.7 |
| gntr family transcriptional regulator | ISP_007506 | P31453 | Negative | 8365310 - 8366047 | 27266.5 |
| mfs transporter | ISP_007507 | P70786 | Negative | 8366104 - 8367414 | 46609.6 |
| fumarate hydratase | ISP_007508 | Q58690 | Positive | 8367562 - 8368431 | 30966.2 |
| fumarate hydratase c-terminal domain-containing protein | ISP_007509 | Q58034 | Positive | 8368445 - 8369077 | 23022.8 |
| 3-hydroxyacyl-coa dehydrogenase family protein | ISP_007510 | P52041 | Positive | 8369074 - 8369934 | 30183.3 |
| hypothetical protein | ISP_007511 | Not Available | Negative | 8369969 - 8370250 | 10340.2 |
| sam-dependent methyltransferase | ISP_007512 | Not Available | Negative | 8370291 - 8371151 | 30174.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
