Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme-binding protein | ISP_007483 | Q9RDA3 | Negative | 8337366 - 8337836 | 16433.6 |
| gfo/idh/moca family oxidoreductase | ISP_007484 | Q6DF30 | Negative | 8337833 - 8338888 | 36995.1 |
| mfs transporter | ISP_007485 | O31563 | Positive | 8339032 - 8340294 | 44666.5 |
| laci family transcriptional regulator | ISP_007486 | Q05954 | Negative | 8340337 - 8341380 | 37183.4 |
| extracellular solute-binding protein | ISP_007487 | Q578M8 | Positive | 8341752 - 8343134 | 48179.6 |
| sugar abc transporter permease | ISP_007488 | P29823 | Positive | 8343131 - 8344060 | 33675.9 |
| carbohydrate abc transporter permease | ISP_007489 | Q9KEE9 | Positive | 8344057 - 8344953 | 32497.3 |
| family 10 glycosylhydrolase | ISP_007490 | Not Available | Positive | 8344950 - 8346998 | 74464.1 |
| alpha/beta fold hydrolase | ISP_007491 | Q59093 | Positive | 8346991 - 8347782 | 28595.1 |
| gntr family transcriptional regulator | ISP_007492 | P37335 | Negative | 8347809 - 8348465 | 23207.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
