Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_007473 | Not Available | Positive | 8327645 - 8327812 | 5828.3 |
| nad(p)h-binding protein | ISP_007474 | P52556 | Positive | 8327838 - 8328476 | 22364.2 |
| helix-turn-helix domain-containing protein | ISP_007475 | P71073 | Negative | 8328676 - 8330217 | 54692.2 |
| class ii aldolase/adducin family protein | ISP_007476 | Q9A8Z4 | Positive | 8330358 - 8331128 | 28313.7 |
| mhs family mfs transporter | ISP_007477 | P37643 | Positive | 8331181 - 8332512 | 46506.7 |
| mbl fold metallo-hydrolase | ISP_007478 | Q2IJC6 | Positive | 8332509 - 8333495 | 35102.0 |
| duf1080 domain-containing protein | ISP_007479 | Not Available | Negative | 8333614 - 8334522 | 33061.7 |
| sugar phosphate isomerase/epimerase | ISP_007480 | P54724 | Negative | 8334519 - 8335535 | 37954.2 |
| sugar phosphate isomerase/epimerase | ISP_007481 | A0REB7 | Negative | 8335532 - 8336434 | 32176.6 |
| hypothetical protein | ISP_007482 | Q8UEU8 | Negative | 8336452 - 8337369 | 33574.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
