Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_007463 | Not Available | Negative | 8316605 - 8317123 | 19338.4 |
| histidine kinase | ISP_007464 | P55183 | Positive | 8317282 - 8318457 | 40947.1 |
| response regulator transcription factor | ISP_007465 | P55184 | Positive | 8318454 - 8319113 | 23355.5 |
| is30 family transposase | ISP_007466 | P9WQ52 | Negative | 8319172 - 8321027 | 65016.3 |
| helix-turn-helix domain-containing protein | ISP_007467 | Not Available | Negative | 8321160 - 8322128 | 34095.1 |
| mandelate racemase/muconate lactonizing enzyme family protein | ISP_007468 | Q8XVS8 | Positive | 8322592 - 8323731 | 40907.9 |
| mfs transporter | ISP_007469 | O34456 | Positive | 8323728 - 8324993 | 44111.0 |
| lysr substrate-binding domain-containing protein | ISP_007470 | Q9X725 | Positive | 8325070 - 8325981 | 32441.9 |
| helix-turn-helix transcriptional regulator | ISP_007471 | O27346 | Negative | 8326392 - 8326802 | 15151.1 |
| dsba family oxidoreductase | ISP_007472 | Not Available | Positive | 8326899 - 8327624 | 26452.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
