Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase | ISP_007453 | O66113 | Negative | 8311479 - 8311643 | 5593.69 |
| hypothetical protein | ISP_007454 | Not Available | Negative | 8311580 - 8311732 | 5495.5 |
| hypothetical protein | ISP_007455 | P21874 | Negative | 8311747 - 8312052 | 10420.4 |
| thiamine pyrophosphate-dependent enzyme | ISP_007456 | O31404 | Negative | 8312259 - 8312414 | 5464.38 |
| hypothetical protein | ISP_007457 | O31404 | Negative | 8312366 - 8312581 | 7471.0 |
| is30 family transposase | ISP_007458 | O34421 | Positive | 8312644 - 8312909 | 9261.97 |
| cytochrome p450 | ISP_007459 | P18327 | Negative | 8312899 - 8314122 | 44835.7 |
| fad-dependent oxidoreductase | ISP_007460 | P43494 | Negative | 8314146 - 8315330 | 41248.4 |
| ferredoxin | ISP_007461 | P18325 | Negative | 8315327 - 8315527 | 6914.23 |
| zinc-binding dehydrogenase | ISP_007462 | Q06004 | Negative | 8315547 - 8316560 | 34614.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
