Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | ISP_007443 | H3JQW0 | Positive | 8305586 - 8306677 | 40183.5 |
| hypothetical protein | ISP_007444 | Not Available | Positive | 8306677 - 8306868 | 6996.22 |
| nuclear transport factor 2 family protein | ISP_007445 | Not Available | Negative | 8306916 - 8307314 | 14514.1 |
| nuclear transport factor 2 family protein | ISP_007446 | Not Available | Negative | 8307325 - 8307723 | 14475.0 |
| isochorismatase family protein | ISP_007447 | P94573 | Positive | 8308049 - 8308615 | 19903.8 |
| sdr family nad(p)-dependent oxidoreductase | ISP_007448 | P96825 | Negative | 8308754 - 8309647 | 30943.8 |
| enoyl-coa hydratase | ISP_007449 | Not Available | Negative | 8309620 - 8309796 | 6278.49 |
| is30 family transposase | ISP_007450 | Not Available | Negative | 8310032 - 8310094 | 2023.53 |
| hypothetical protein | ISP_007451 | Not Available | Positive | 8310130 - 8310318 | 6929.45 |
| tetr/acrr family transcriptional regulator | ISP_007452 | Q0S7V2 | Positive | 8310767 - 8311462 | 26356.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
