Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin reductase family protein | ISP_007413 | M4YFG7 | Positive | 8274162 - 8274680 | 18456.3 |
| mycofactocin-coupled sdr family oxidoreductase | ISP_007414 | A0R518 | Positive | 8274707 - 8275564 | 30486.3 |
| pyridoxamine 5'-phosphate oxidase family protein | ISP_007415 | A8HRJ3 | Negative | 8275773 - 8276198 | 15348.2 |
| acetyl-coa c-acyltransferase | ISP_007416 | I6XHJ3 | Negative | 8276332 - 8277477 | 39670.3 |
| coa transferase | ISP_007417 | O06543 | Negative | 8277474 - 8278592 | 38636.4 |
| crotonase/enoyl-coa hydratase family protein | ISP_007418 | O53561 | Negative | 8278650 - 8279285 | 21527.3 |
| acyl-coa dehydrogenase family protein | ISP_007419 | P79274 | Positive | 8279356 - 8280504 | 41349.7 |
| sdr family nad(p)-dependent oxidoreductase | ISP_007420 | P9WGQ6 | Positive | 8280514 - 8281275 | 26401.7 |
| tetr/acrr family transcriptional regulator | ISP_007421 | Not Available | Positive | 8281275 - 8281979 | 24999.9 |
| amp-binding protein | ISP_007422 | Q9EY88 | Negative | 8281900 - 8284926 | 107010.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
