Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | ISP_007393 | Not Available | Negative | 8254448 - 8254915 | 17020.3 |
| cytochrome p450 | ISP_007394 | Q53215 | Negative | 8254921 - 8256120 | 45077.4 |
| crotonase/enoyl-coa hydratase family protein | ISP_007395 | O53561 | Negative | 8256178 - 8256942 | 26209.5 |
| phosphotransferase family protein | ISP_007396 | Q6JQN1 | Positive | 8257057 - 8258067 | 36080.4 |
| acyl-coa dehydrogenase family protein | ISP_007397 | P96831 | Positive | 8258076 - 8259395 | 48745.6 |
| glucose 1-dehydrogenase | ISP_007398 | Q2UEK6 | Positive | 8259392 - 8260129 | 25489.4 |
| pentapeptide repeat-containing protein | ISP_007399 | Not Available | Positive | 8260177 - 8261364 | 42375.3 |
| coa transferase | ISP_007400 | Q93AM1 | Negative | 8261377 - 8262597 | 43351.3 |
| ferredoxin | ISP_007401 | Q83WF4 | Negative | 8262621 - 8262809 | 6540.65 |
| nad(p)-binding domain-containing protein | ISP_007402 | P29266 | Negative | 8262806 - 8263618 | 27858.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
