Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_000722 | Not Available | Positive | 745811 - 745996 | 6556.0 |
| 30s ribosomal protein s11 | ISP_000723 | A4FPJ4 | Positive | 746015 - 746422 | 14355.3 |
| 30s ribosomal protein s4 | ISP_000724 | A4FPJ3 | Positive | 746446 - 747051 | 23312.3 |
| dna-directed rna polymerase subunit alpha | ISP_000725 | A4FPJ2 | Positive | 747159 - 748229 | 38199.2 |
| 50s ribosomal protein l17 | ISP_000726 | A4FPJ1 | Positive | 748274 - 748822 | 19808.4 |
| trna pseudouridine(38-40) synthase trua | ISP_000727 | Q2JFE6 | Positive | 748896 - 749726 | 30017.8 |
| hypothetical protein | ISP_000728 | Not Available | Negative | 749796 - 750515 | 25769.5 |
| type vii secretion protein ecce | ISP_000729 | A0QNL0 | Negative | 750589 - 751770 | 41453.3 |
| type vii secretion protein eccb | ISP_000730 | P9WNR0 | Positive | 752503 - 754080 | 54976.4 |
| hypothetical protein | ISP_000731 | Not Available | Positive | 754145 - 754462 | 10570.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
