Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | ISP_007373 | Q0S7V2 | Positive | 8232783 - 8233478 | 26614.1 |
| tetr/acrr family transcriptional regulator | ISP_007374 | Q7A3C7 | Negative | 8233845 - 8234552 | 25052.6 |
| nadp-dependent oxidoreductase | ISP_007375 | O53901 | Positive | 8234654 - 8235598 | 31163.1 |
| doxx family protein | ISP_007376 | Not Available | Positive | 8235640 - 8236011 | 12929.5 |
| llm class flavin-dependent oxidoreductase | ISP_007377 | P55684 | Positive | 8236037 - 8237086 | 37816.1 |
| nad(p)h-binding protein | ISP_007378 | Q923D2 | Positive | 8237083 - 8237724 | 22767.4 |
| nad(p)h-binding protein | ISP_007379 | P39315 | Positive | 8237755 - 8238528 | 26328.2 |
| abc transporter atp-binding protein | ISP_007380 | P21630 | Negative | 8238918 - 8239610 | 24075.6 |
| branched-chain amino acid abc transporter permease/atp-binding protein | ISP_007381 | P21629 | Negative | 8239634 - 8242378 | 94683.4 |
| abc transporter substrate-binding protein | ISP_007382 | Not Available | Negative | 8242386 - 8243735 | 45716.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
