Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_007333 | Not Available | Positive | 8198374 - 8198736 | 13108.8 |
| helix-turn-helix transcriptional regulator | ISP_007334 | Not Available | Positive | 8198745 - 8199479 | 27710.2 |
| hypothetical protein | ISP_007335 | Not Available | Positive | 8199476 - 8199766 | 10912.1 |
| hypothetical protein | ISP_007336 | Not Available | Positive | 8199806 - 8200060 | 8915.64 |
| hypothetical protein | ISP_007337 | Not Available | Negative | 8200052 - 8200789 | 25753.8 |
| nudix hydrolase | ISP_007338 | P32091 | Negative | 8200803 - 8201219 | 15409.3 |
| taud/tfda family dioxygenase | ISP_007339 | Not Available | Positive | 8201385 - 8201795 | 14409.3 |
| hypothetical protein | ISP_007340 | Not Available | Positive | 8202139 - 8202468 | 12285.6 |
| gnat family n-acetyltransferase | ISP_007341 | Not Available | Negative | 8202498 - 8203109 | 21841.2 |
| hypothetical protein | ISP_007342 | P9WKZ8 | Negative | 8203123 - 8203716 | 19897.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
