Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_007323 | Not Available | Negative | 8190387 - 8191511 | 39896.3 |
| hypothetical protein | ISP_007324 | Not Available | Negative | 8191508 - 8192059 | 20686.6 |
| helix-turn-helix domain-containing protein | ISP_007325 | P9WJB6 | Negative | 8192056 - 8192514 | 17163.1 |
| helix-turn-helix transcriptional regulator | ISP_007326 | Q9Z9W1 | Positive | 8192667 - 8193119 | 16715.9 |
| hypothetical protein | ISP_007327 | Not Available | Positive | 8193305 - 8194975 | 62106.7 |
| prepilin peptidase | ISP_007328 | Not Available | Negative | 8194970 - 8195599 | 21474.1 |
| duf397 domain-containing protein | ISP_007329 | Not Available | Negative | 8195985 - 8196176 | 6698.68 |
| helix-turn-helix domain-containing protein | ISP_007330 | Not Available | Negative | 8196198 - 8197061 | 32310.2 |
| hypothetical protein | ISP_007331 | Not Available | Positive | 8197309 - 8197641 | 11958.8 |
| helix-turn-helix domain-containing protein | ISP_007332 | Not Available | Positive | 8197638 - 8198180 | 19383.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
