Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | ISP_007303 | Not Available | Negative | 8175849 - 8176067 | 7435.28 |
| site-specific dna-methyltransferase | ISP_007304 | P30774 | Negative | 8176064 - 8176870 | 29757.1 |
| site-specific dna-methyltransferase | ISP_007305 | P14243 | Negative | 8176867 - 8177247 | 14036.6 |
| hypothetical protein | ISP_007306 | Not Available | Positive | 8177591 - 8177821 | 8495.69 |
| hypothetical protein | ISP_007307 | Q9RVY3 | Negative | 8177840 - 8180533 | 95439.8 |
| hypothetical protein | ISP_007308 | Not Available | Negative | 8180548 - 8180952 | 13429.1 |
| hypothetical protein | ISP_007309 | Not Available | Negative | 8180949 - 8181371 | 14436.4 |
| hypothetical protein | ISP_007310 | Not Available | Negative | 8181368 - 8181739 | 12607.0 |
| hypothetical protein | ISP_007311 | Not Available | Negative | 8181739 - 8181933 | 6909.43 |
| type ii secretion system protein | ISP_007312 | Not Available | Negative | 8181947 - 8182798 | 29804.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
