Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20 family metallopeptidase | ISP_007293 | A3KG59 | Positive | 8165693 - 8167015 | 45665.0 |
| trypsin-like peptidase domain-containing protein | ISP_007294 | O53896 | Positive | 8167114 - 8168133 | 33543.9 |
| duf3224 domain-containing protein | ISP_007295 | Not Available | Negative | 8168249 - 8168623 | 13039.1 |
| duf853 domain-containing protein | ISP_007296 | P39342 | Negative | 8168693 - 8170219 | 53368.8 |
| oligoribonuclease | ISP_007297 | Q0SGU7 | Positive | 8170333 - 8170941 | 22679.0 |
| Trna-his | Not Available | Not Available | Positive | 8171019 - 8171094 | Not Available |
| glycine betaine/l-proline transporter prop | ISP_007299 | Q47421 | Positive | 8171329 - 8172735 | 50781.2 |
| ig-like domain-containing protein | ISP_007300 | O53223 | Negative | 8172732 - 8173721 | 34771.4 |
| Trna-lys | Not Available | Not Available | Positive | 8174103 - 8174175 | Not Available |
| hypothetical protein | ISP_007302 | Not Available | Positive | 8174409 - 8174798 | 13354.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
