Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 127 protein | ISP_007273 | E8MGH8 | Positive | 8141061 - 8142941 | 68262.7 |
| ricin domain-containing protein | ISP_007274 | Not Available | Positive | 8143060 - 8144145 | 38245.8 |
| ricin domain-containing protein | ISP_007275 | Not Available | Positive | 8144167 - 8146848 | 93798.4 |
| precorrin-2 c(20)-methyltransferase | ISP_007276 | P66878 | Negative | 8146920 - 8148407 | 52341.2 |
| precorrin-8x methylmutase | ISP_007277 | Q9HZU2 | Negative | 8148404 - 8149027 | 21657.2 |
| nitrite/sulfite reductase | ISP_007278 | P21637 | Negative | 8149024 - 8150100 | 37045.2 |
| duf6191 domain-containing protein | ISP_007279 | Not Available | Negative | 8150105 - 8150419 | 11613.0 |
| abc transporter atp-binding protein | ISP_007280 | Q8XXY9 | Positive | 8150529 - 8151455 | 34189.5 |
| abc transporter permease | ISP_007281 | Not Available | Positive | 8151452 - 8152303 | 29934.4 |
| helix-turn-helix transcriptional regulator | ISP_007282 | Q57720 | Positive | 8152306 - 8152539 | 8854.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
