Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | ISP_007263 | P65529 | Positive | 8131149 - 8132618 | 51310.3 |
| tetr family transcriptional regulator | ISP_007264 | A3N3Q5 | Positive | 8132785 - 8133414 | 22934.5 |
| class i sam-dependent methyltransferase | ISP_007265 | Q45500 | Negative | 8133368 - 8134255 | 31837.7 |
| voc family protein | ISP_007266 | Not Available | Negative | 8134257 - 8134601 | 12732.7 |
| ribbon-helix-helix domain-containing protein | ISP_007267 | Not Available | Negative | 8134603 - 8134761 | 5881.94 |
| ricin-type beta-trefoil lectin domain protein | ISP_007268 | B3PGJ1 | Positive | 8134899 - 8136806 | 65573.9 |
| laci family transcriptional regulator | ISP_007269 | O87590 | Negative | 8136803 - 8137834 | 36127.3 |
| sugar abc transporter substrate-binding protein | ISP_007270 | Q578M8 | Positive | 8138011 - 8139318 | 44962.9 |
| sugar abc transporter permease | ISP_007271 | O32155 | Positive | 8139321 - 8140247 | 33368.2 |
| carbohydrate abc transporter permease | ISP_007272 | O50501 | Positive | 8140244 - 8141047 | 28280.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
